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MCP servers · 11th of 14 by usage

PubChem Compound Scraper

Scrape PubChem - the world's largest free chemistry database with 100M+ compounds. Search by name, CID, SMILES, or full-text. Returns molecular formula, weight, SMILES, InChI, logP, H-bond counts, synonyms, and more.

Price
$0.005 per result
Runs to date
1
Teams using it
2
Last updated
2026-06-02

Run it from the API

POST · run and wait for the datasetcURL
curl -X POST "https://api.apify.com/v2/acts/crawlerbros~pubchem-scraper/run-sync-get-dataset-items" \
  -H "Content-Type: application/json" \
  -d '{ "maxItems": 50 }' \
  -G --data-urlencode "token=$APIFY_TOKEN"

Billed $0.005 per result. The call returns the dataset directly, so there is nothing to poll for a run of this size.

PubChem Compound Scraper vs the other MCP servers scrapers

All 14 are ours and all are maintained, so the choice is about fit rather than quality. 1 of them cost less per result.

ScraperPriceRunsRating
PubChem Compound Scraperthis page$0.0051not yet rated
Markdownify MCP Server$0.002965.0 (2)
USPTO Patent Search Scraper$0.00546not yet rated
GLEIF LEI Scraper$0.00512not yet rated
ClinicalTrials.gov Scraper$0.005105.0 (1)
TheMealDB Recipe Scraper$0.0059not yet rated
Chicago Food Inspections Scraper$0.00585.0 (1)
US Election Data Scraper$0.0058not yet rated
NSF Award Search Scraper$0.0057not yet rated
College Scorecard Scraper$0.0052not yet rated
NPI Provider Registry Scraper$0.0052not yet rated
CPAN Module Scraper$0.00504.0 (1)
Victoria and Albert Museum Scraper$0.0050not yet rated
Case Law Scraper$0.0050not yet rated